Stem-loop nbr-mir-23a-1

Accession

MI0034434

Description

Neolamprologus brichardi nbr-mir-23a-1 precursor miRNA

Sequence

ggaauuccuggcagagugauuuuuuuuaaacuagaggacugaAUCACAUUGCCAGGGAUUUCCA
((((((((((((((.((((((((((((......)))))..))))))).))))))))))))))..

Structure

--              a       --     aa 
  ggaauuccuggcag gugauuu  uuuuu  a
  |||||||||||||| |||||||  |||||   
  CUUUAGGGACCGUU CACUAag  aggag  c
AC              A       uc     au 

Annotation confidence Not enough data

Genome context

JH422293.1: 5861874-5861937 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from nbr-mir-23a-1

Mature nbr-miR-23a

• Accession: MIMAT0042542
• Description: Neolamprologus brichardi nbr-miR-23a mature miRNA
• Sequence: 43 - AUCACAUUGCCAGGGAUUUCCA - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381