Stem-loop nbr-mir-338-3

Accession

MI0034394

Description

Neolamprologus brichardi nbr-mir-338-3 precursor miRNA

Sequence

aacaauauccuggugcugccugagugcucccuaaagacUCCAGCAUCAGUGAUUUUGUUG
(((((.((((((((((((...((((.((......))))))))))))))).))).))))).

Structure

-     u   -         ccu    g  cc 
 aacaa auc cuggugcug   gagu cu  c
 ||||| ||| |||||||||   |||| ||   
 UUGUU UAG GACUACGAC   CUca ga  u
G     U   U         ---    -  aa 

Annotation confidence Not enough data

Genome context

JH422300.1: 3696405-3696464 [+]

Mature nbr-miR-338

• Accession: MIMAT0042544
• Description: Neolamprologus brichardi nbr-miR-338 mature miRNA
• Sequence: 39 - UCCAGCAUCAGUGAUUUUGUUG - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381