Stem-loop nbr-mir-27a

Accession

MI0034375

Description

Neolamprologus brichardi nbr-mir-27a precursor miRNA

Sequence

aggacuuagcucgcuccgugaacaguucagugaaguccugugUUCACAGUGGCUAAGUUCCGC
.(((((((((.((((..(((((((...(((.(....))))))))))))))))))))))))...

Structure

--a         u    cc       guu   u a 
   ggacuuagc cgcu  gugaaca   cag g a
   ||||||||| ||||  |||||||   ||| |  
   CUUGAAUCG GUGA  CACUUgu   guc c g
CGC         -    --       ---   - u 

Annotation confidence Not enough data

Genome context

JH422296.1: 728790-728852 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from nbr-mir-27a

Mature nbr-miR-27a

• Accession: MIMAT0042530
• Description: Neolamprologus brichardi nbr-miR-27a mature miRNA
• Sequence: 43 - UUCACAGUGGCUAAGUUCCGC - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381