Stem-loop nbr-mir-731

Accession

MI0034356

Description

Neolamprologus brichardi nbr-mir-731 precursor miRNA

Sequence

AAUGACACGUUUUCUCCCGGAUUgcugugagcaggaaacgcaaccgggaauuucgugucagcc
..(((((((.....((((((.((((.((.........))))))))))))....)))))))...

Structure

-AA       UUUUC      A    u  gag 
   UGACACG     UCCCGG UUgc gu   c
   |||||||     |||||| |||| ||   a
   acugugc     agggcc aacg ca   g
ccg       -uuua      -    -  aag 

Annotation confidence Not enough data

Genome context

JH422281.1: 5152063-5152125 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from nbr-mir-731

Mature nbr-miR-731

• Accession: MIMAT0042516
• Description: Neolamprologus brichardi nbr-miR-731 mature miRNA
• Sequence: 1 - AAUGACACGUUUUCUCCCGGAUU - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381