Stem-loop nbr-mir-301b-2

Accession

MI0034340

Description

Neolamprologus brichardi nbr-mir-301b-2 precursor miRNA

Sequence

uuugacaauguugcacuacuguaccauccauucuagCAGUGCAAUAGUAUUGUCAUAGC
..(((((((((((((((.(((............))).))))))))...)))))))....

Structure

--uu       ---        a   uacca 
    ugacaau   guugcacu cug     u
    |||||||   |||||||| |||      
    ACUGUUA   UAACGUGA gau     c
CGAU       UGA        C   cuuac 

Annotation confidence Not enough data

Genome context

JH422287.1: 3989156-3989214 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from nbr-mir-301b-2

Mature nbr-miR-301b

• Accession: MIMAT0042504
• Description: Neolamprologus brichardi nbr-miR-301b mature miRNA
• Sequence: 37 - CAGUGCAAUAGUAUUGUCAUAGC - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381