Stem-loop nbr-mir-183-2

Accession

MI0034275

Description

Neolamprologus brichardi nbr-mir-183-2 precursor miRNA

Sequence

UAUGGCACUGGUAGAAUUCACUGugagagcucacuaucagugaauuaccauagggccauaaa
((((((..(((((..((((((((..((......))..)))))))))))))....))))))..

Structure

--      --AC     GA        ug  ag 
  UAUGGC    UGGUA  AUUCACUG  ag  c
  ||||||    |||||  ||||||||  ||   
  auaccg    accau  uaagugac  uc  u
aa      ggau     --        ua  ac 

Annotation confidence Not enough data

Genome context

JH422274.1: 7271175-7271236 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from nbr-mir-183-2

Mature nbr-miR-183

• Accession: MIMAT0042467
• Description: Neolamprologus brichardi nbr-miR-183 mature miRNA
• Sequence: 1 - UAUGGCACUGGUAGAAUUCACUG - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381