miRBase entry: nbr-mir-10571

Stem-loop nbr-mir-10571


Accession
MI0034270
Description
Neolamprologus brichardi nbr-mir-10571 precursor miRNA


Sequence

98507 reads, 5588.0 reads per million, 7 experiments
AAGUGACUUUGGCUGGCUUUGGuaaaucacuuagCAAAGAUCUGCUGACGUCACUU
(((((((.(((((.(((((((.(((.....))).))))).)).))))).)))))))

Structure
       U     U  -     G   a 
AAGUGAC UUGGC GG CUUUG uaa u
||||||| ||||| || ||||| ||| c
UUCACUG AGUCG CU GAAAC auu a
       C     U  A     g   c 


Annotation confidence Medium
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Genome context
JH422285.1: 10495942-10495997 [+]

Database links

Mature nbr-miR-10571-5p

Accession MIMAT0060075
Description Neolamprologus brichardi nbr-miR-10571-5p mature miRNA
Sequence 1 - AAGUGACUUUGGCUGGCUUUGG - 22
Evidence experimental
Illumina [1]

Mature nbr-miR-10571-3p

Accession MIMAT0042463
Description Neolamprologus brichardi nbr-miR-10571-3p mature miRNA
Sequence 35 - CAAAGAUCUGCUGACGUCACUU - 56
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381