miRBase entry: mze-mir-10544

Stem-loop mze-mir-10544


Accession
MI0034257
Description
Metriaclima zebra mze-mir-10544 precursor miRNA


Sequence

UAGGCGUGUCACUGCGUGUCACAgucacugcuugcgcacggggccacgcccugc
..((((((...((.(((((((.(((....))))).))))).)).))))))....

Structure
--UA      UCA  G     -  C   c 
    GGCGUG   CU CGUGU CA Agu a
    ||||||   || ||||| || |||  
    ccgcac   gg gcacg gu ucg c
cguc      --c  g     c  -   u 


Annotation confidence Not enough data
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Genome context
AGTA03000086.1: 2063643-2063696 [-]

Database links

Mature mze-miR-10544

Accession MIMAT0042453
Description Metriaclima zebra mze-miR-10544 mature miRNA
Sequence 1 - UAGGCGUGUCACUGCGUGUCACA - 23
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381