miRBase entry: mze-mir-449a

Accession

MI0034252

Description

Metriaclima zebra mze-mir-449a precursor miRNA

Sequence

AGGCAGUGUCUUGUUAGCUGGUaguuucuuccugugccagcucaccugcugcugcccu
.(((((((.(..((.((((((((...........)))))))).))..).)))))))..

Structure

-A       U UU  U        guuu 
  GGCAGUG C  GU AGCUGGUa    c
  ||||||| |  || ||||||||    u
  ccgucgu g  ca ucgaccgu    u
uc       c uc  c        gucc

Annotation confidence Not enough data

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Genome context

AGTA03000061.1: 1646812-1646869 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mze-mir-449a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Accession	MIMAT0042448
Description	Metriaclima zebra mze-miR-449a mature miRNA
Sequence	1 - AGGCAGUGUCUUGUUAGCUGGU - 22
Evidence	experimental Illumina [1]

PubMed ID: 25186727
The genomic substrate for adaptive radiation in African cichlid fish
"Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
"Nature (2014) 513:375-381