Stem-loop mze-mir-449b

Accession

MI0034251

Description

Metriaclima zebra mze-mir-449b precursor miRNA

Sequence

UGGCAGUGUAAUGUUAGCUGACguuucuucagccagcucacacugcucugcuacu
((((((.(((.(((.(((((.(.........).))))).))).))).))))))..

Structure

--      U   A   U     A guu 
  UGGCAG GUA UGU AGCUG C   u
  |||||| ||| ||| ||||| |   c
  aucguc cgu aca ucgac g   u
uc      u   c   c     c acu 

Annotation confidence Not enough data

Genome context

AGTA03000061.1: 1647014-1647068 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mze-mir-449b

Mature mze-miR-449b

• Accession: MIMAT0042447
• Description: Metriaclima zebra mze-miR-449b mature miRNA
• Sequence: 1 - UGGCAGUGUAAUGUUAGCUGAC - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381