Stem-loop mze-mir-33a

Accession

MI0034242

Description

Metriaclima zebra mze-mir-33a precursor miRNA

Sequence

254 reads, 15.0 reads per million, 7 experiments

gugcaUUGUAGUUGCAUUGCAUGauccugaagccgagugCAAUGUGUCUGCAGUGCAGUA
.((((((((((..(((((((((..((........)))))))))))..))))))))))...

Structure

--g          UU         Ga  cug 
   ugcaUUGUAG  GCAUUGCAU  uc   a
   ||||||||||  |||||||||  ||    
   ACGUGACGUC  UGUAACgug  ag   a
AUG          UG         --  ccg 

Annotation confidence Medium

Genome context

AGTA03000153.1: 2655342-2655401 [-]

Mature mze-miR-33a-5p

• Accession: MIMAT0060062
• Description: Metriaclima zebra mze-miR-33a-5p mature miRNA
• Sequence: 6 - UUGUAGUUGCAUUGCAUG - 23
• Evidence: experimental ; Illumina [1]

Mature mze-miR-33a-3p

• Accession: MIMAT0042436
• Description: Metriaclima zebra mze-miR-33a-3p mature miRNA
• Sequence: 40 - CAAUGUGUCUGCAGUGCAGUA - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381