miRBase entry: mze-mir-10d

Stem-loop mze-mir-10d


Accession
MI0034235
Description
Metriaclima zebra mze-mir-10d precursor miRNA


Sequence

CACCCUGUAGAUCCGAAUUUGUguaaauacagcagcagccacaaauucgcaucuuggggagu
..(((((.((((.((((((((((........((....)))))))))))).)))))))))...

Structure
-CA     U    C          uaaauaca  a 
   CCCUG AGAU CGAAUUUGUg        gc g
   ||||| |||| ||||||||||        ||  
   ggggu ucua gcuuaaacac        cg c
uga     -    c          --------  a 


Annotation confidence Not enough data
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Genome context
AGTA03000218.1: 2112236-2112297 [+]

Database links

Mature mze-miR-10d

Accession MIMAT0042429
Description Metriaclima zebra mze-miR-10d mature miRNA
Sequence 1 - CACCCUGUAGAUCCGAAUUUGU - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381