miRBase entry: mze-mir-457

Stem-loop mze-mir-457

Accession

MI0034232

Description

Metriaclima zebra mze-mir-457 precursor miRNA

Sequence

UAGCAGCACAUCAUUACUGGUAuuuuucacugcauuaccaguauguuaugugcugcuucu
.((((((((((...((((((((.............))))))))....))))))))))...

Structure

--U          -CAU        uuuuu 
   AGCAGCACAU    UACUGGUA     c
   ||||||||||    ||||||||     a
   ucgucgugua    augaccau     c
ucu          uugu        uacgu

Annotation confidence Not enough data

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Genome context

AGTA03000382.1: 444046-444105 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from mze-mir-457

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature mze-miR-457

Accession	MIMAT0042426
Description	Metriaclima zebra mze-miR-457 mature miRNA
Sequence	1 - UAGCAGCACAUCAUUACUGGUA - 22
Evidence	experimental Illumina [1]

References

PubMed ID: 25186727
The genomic substrate for adaptive radiation in African cichlid fish
"Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
"Nature (2014) 513:375-381