miRBase entry: mze-mir-551

Stem-loop mze-mir-551


Accession
MI0034228
Description
Metriaclima zebra mze-mir-551 precursor miRNA


Sequence

gaaaccaaguguggguguggccugaaaaagaaauaugGCGACCCAUCCUUUGUUUCUG
(((((.(((.((((((...(((..............))).)))))).))).)))))..

Structure
--     c   u      gug   ugaaaa 
  gaaac aag gugggu   gcc      a
  ||||| ||| ||||||   |||       
  CUUUG UUC UACCCA   CGg      g
GU     U   C      --G   uauaaa 


Annotation confidence Not enough data
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Genome context
AGTA03000100.1: 1266526-1266583 [+]

Database links

Mature mze-miR-551

Accession MIMAT0042422
Description Metriaclima zebra mze-miR-551 mature miRNA
Sequence 38 - GCGACCCAUCCUUUGUUUCUG - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381