miRBase entry: mze-mir-19c

Stem-loop mze-mir-19c

Accession

MI0034225

Description

Metriaclima zebra mze-mir-19c precursor miRNA

Sequence

aguuuugaugguuuguucucagcuucugaaagacucugcUGUGCAAAUCCAUGCAAAGCUCU
((((((((((((((((...((((..............)))).))))).)))).)))))))..

Structure

--       -    -     ucu    uucuga 
  aguuuug augg uuugu   cagc      a
  ||||||| |||| |||||   ||||       
  UCGAAAC UACC AAACG   GUcg      a
UC       G    U     --U    ucucag

Annotation confidence Not enough data

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Genome context

AGTA03000179.1: 1743423-1743484 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from mze-mir-19c

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature mze-miR-19c

Accession	MIMAT0042419
Description	Metriaclima zebra mze-miR-19c mature miRNA
Sequence	40 - UGUGCAAAUCCAUGCAAAGCUCU - 62
Evidence	experimental Illumina [1]

References

PubMed ID: 25186727
The genomic substrate for adaptive radiation in African cichlid fish
"Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
"Nature (2014) 513:375-381