miRBase entry: mze-mir-31

Stem-loop mze-mir-31


Accession
MI0034224
Description
Metriaclima zebra mze-mir-31 precursor miRNA


Sequence

AGGCAAGAUGUUGGCAUAGCUGuugaguugaaaacccugcuaugccgacaaauugccauc
.(((((..((((((((((((.(((........)))...))))))))))))..)))))...

Structure
--A     GA            --U   gag 
   GGCAA  UGUUGGCAUAGC   Guu   u
   |||||  ||||||||||||   |||    
   ccguu  acagccguaucg   caa   u
cua     aa            ucc   aag 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
AGTA03000160.1: 442250-442309 [+]

Database links

Mature mze-miR-31

Accession MIMAT0042418
Description Metriaclima zebra mze-miR-31 mature miRNA
Sequence 1 - AGGCAAGAUGUUGGCAUAGCUG - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381