miRBase entry: mze-mir-23c

Stem-loop mze-mir-23c


Accession
MI0034211
Description
Metriaclima zebra mze-mir-23c precursor miRNA


Sequence

ugugucucuggcaagaugauuugggccacaaaguugaaAUCACAUUGCCAGAGAUUACUG
.(((((((((((((..((((((.(((......))).))))))..)))))))))).)))..

Structure
-u   -          ga      g   ca 
  gug ucucuggcaa  ugauuu ggc  c
  ||| ||||||||||  |||||| |||   
  CAU AGAGACCGUU  ACUAaa uug  a
GU   U          AC      g   aa 


Annotation confidence Not enough data
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Genome context
AGTA03000062.1: 2305399-2305458 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from mze-mir-23c
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mze-miR-23c

Accession MIMAT0042407
Description Metriaclima zebra mze-miR-23c mature miRNA
Sequence 39 - AUCACAUUGCCAGAGAUUACUG - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381