miRBase entry: mze-mir-132b

Stem-loop mze-mir-132b


Accession
MI0034209
Description
Metriaclima zebra mze-mir-132b precursor miRNA


Sequence

ACCGUGGCUUUAGAUUGUUACUcuagcaacagcaccaugguaacagucuacagccaugguc
(((((((((.((((((((((((...((....)).....)))))))))))).))))))))).

Structure
-         U            --cua  a 
 ACCGUGGCU UAGAUUGUUACU     gc a
 ||||||||| ||||||||||||     ||  
 ugguaccga aucugacaaugg     cg c
c         c            uacca  a 


Annotation confidence Not enough data
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Genome context
AGTA03000075.1: 717341-717401 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from mze-mir-132b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mze-miR-132b

Accession MIMAT0042405
Description Metriaclima zebra mze-miR-132b mature miRNA
Sequence 1 - ACCGUGGCUUUAGAUUGUUACU - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381