Stem-loop mze-mir-29b-1

Accession

MI0034206

Description

Metriaclima zebra mze-mir-29b-1 precursor miRNA

Sequence

cugguuucacguggugguuuagaugugugcugcucuugucUAGCACCAUUUGAAAUCAGUGUU
(((((((((.((((((..((((((..(.......)..)))))))))))).)))))))))....

Structure

----         c      gu      gu ug 
    cugguuuca guggug  uuagau  g  c
    ||||||||| ||||||  ||||||  |  u
    GACUAAAGU UACCAC  GAUcug  c  g
UUGU         U      --      uu uc 

Annotation confidence Not enough data

Genome context

AGTA03000610.1: 581-643 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mze-mir-29b-1

Mature mze-miR-29b

• Accession: MIMAT0042402
• Description: Metriaclima zebra mze-miR-29b mature miRNA
• Sequence: 41 - UAGCACCAUUUGAAAUCAGUGUU - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381