miRBase entry: mze-mir-29a-1

Stem-loop mze-mir-29a-1


Accession
MI0034204
Description
Metriaclima zebra mze-mir-29a-1 precursor miRNA


Sequence

accguuuuccucugguguucagaguuuccaucaugucUAGCACCAUUUGAAAUCGGUUA
((((.((((...(((((((.(((............))))))))))...)))).))))..

Structure
--    u    cuc       c   guuuc 
  accg uuuc   ugguguu aga     c
  |||| ||||   ||||||| |||      
  UGGC AAAG   ACCACGA Ucu     a
AU    U    UUU       -   guacu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
AGTA03000042.1: 5123100-5123158 [-]

Database links

Mature mze-miR-29a

Accession MIMAT0042392
Description Metriaclima zebra mze-miR-29a mature miRNA
Sequence 38 - UAGCACCAUUUGAAAUCGGUUA - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381