miRBase entry: mze-mir-23a-2

Stem-loop mze-mir-23a-2

Accession

MI0034185

Description

Metriaclima zebra mze-mir-23a-2 precursor miRNA

Sequence

gguuccuggcaccgugauuugaugcacaaagagaaacaaaaAUCACAUUGCCAGGGAUUUCCA
.((((((((((..(((((((...................)))))))..)))))))))).....

Structure

----g          cc       gaugcaca 
     guuccuggca  gugauuu        a
     ||||||||||  |||||||        a
     UAGGGACCGU  CACUAaa        g
ACCUU          UA       aacaaaga

Annotation confidence Not enough data

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Genome context

AGTA03000280.1: 168241-168303 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from mze-mir-23a-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature mze-miR-23a

Accession	MIMAT0042396
Description	Metriaclima zebra mze-miR-23a mature miRNA
Sequence	42 - AUCACAUUGCCAGGGAUUUCCA - 63
Evidence	experimental Illumina [1]

References

PubMed ID: 25186727
The genomic substrate for adaptive radiation in African cichlid fish
"Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
"Nature (2014) 513:375-381