miRBase entry: mze-mir-23a-1

Stem-loop mze-mir-23a-1


Accession
MI0034184
Description
Metriaclima zebra mze-mir-23a-1 precursor miRNA


Sequence

ggaauuccuggcagagugauuuuuuuuaaacuagaggacugaAUCACAUUGCCAGGGAUUUCCA
((((((((((((((.((((((((((((......)))))..))))))).))))))))))))))..

Structure
--              a       --     aa 
  ggaauuccuggcag gugauuu  uuuuu  a
  |||||||||||||| |||||||  |||||   
  CUUUAGGGACCGUU CACUAag  aggag  c
AC              A       uc     au 


Annotation confidence Not enough data
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Genome context
AGTA03000104.1: 2538913-2538976 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from mze-mir-23a-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mze-miR-23a

Accession MIMAT0042396
Description Metriaclima zebra mze-miR-23a mature miRNA
Sequence 43 - AUCACAUUGCCAGGGAUUUCCA - 64
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381