miRBase entry: mze-mir-23a-1

Stem-loop mze-mir-23a-1

Accession

MI0034184

Description

Metriaclima zebra mze-mir-23a-1 precursor miRNA

Sequence

ggaauuccuggcagagugauuuuuuuuaaacuagaggacugaAUCACAUUGCCAGGGAUUUCCA
((((((((((((((.((((((((((((......)))))..))))))).))))))))))))))..

Structure

--              a       --     aa 
  ggaauuccuggcag gugauuu  uuuuu  a
  |||||||||||||| |||||||  |||||   
  CUUUAGGGACCGUU CACUAag  aggag  c
AC              A       uc     au

Annotation confidence Not enough data

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Genome context

AGTA03000104.1: 2538913-2538976 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mze-mir-23a-1

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature mze-miR-23a

Accession	MIMAT0042396
Description	Metriaclima zebra mze-miR-23a mature miRNA
Sequence	43 - AUCACAUUGCCAGGGAUUUCCA - 64
Evidence	experimental Illumina [1]

References

PubMed ID: 25186727
The genomic substrate for adaptive radiation in African cichlid fish
"Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
"Nature (2014) 513:375-381