miRBase entry: mze-mir-218a-1

Stem-loop mze-mir-218a-1


Accession
MI0034182
Description
Metriaclima zebra mze-mir-218a-1 precursor miRNA


Sequence

UUGUGCUUGAUCUAACCAUGUGgcugccagguuccuaucguggaacaugguucuuucaagcaccaug
..((((((((...((((((((..((((..(((....))))))).))))))))...))))))))....

Structure
--UU        UCU        Gg    ca   u 
    GUGCUUGA   AACCAUGU  cugc  ggu c
    ||||||||   ||||||||  ||||  |||  
    cacgaacu   uugguaca  ggug  cua c
guac        uuc        -a    --   u 


Annotation confidence Not enough data
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Genome context
AGTA03000135.1: 644767-644833 [+]

Database links

Mature mze-miR-218a

Accession MIMAT0042317
Description Metriaclima zebra mze-miR-218a mature miRNA
Sequence 1 - UUGUGCUUGAUCUAACCAUGUG - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381