miRBase entry: mze-mir-29a-3

Stem-loop mze-mir-29a-3

Accession

MI0034176

Description

Metriaclima zebra mze-mir-29a-3 precursor miRNA

Sequence

acugauuucuucuggugcuuagagcccgcugaagccuucUAGCACCAUUUGAAAUCGGUUA
(((((((((...(((((((.((((...((....)).)))))))))))...)))))))))..

Structure

--         uuc       u    ccc  u 
  acugauuuc   uggugcu agag   gc g
  |||||||||   ||||||| ||||   ||  
  UGGCUAAAG   ACCACGA Ucuu   cg a
AU         UUU       -    --c  a

Annotation confidence Not enough data

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Genome context

AGTA03000610.1: 418-478 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mze-mir-29a-3

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature mze-miR-29a

Accession	MIMAT0042392
Description	Metriaclima zebra mze-miR-29a mature miRNA
Sequence	40 - UAGCACCAUUUGAAAUCGGUUA - 61
Evidence	experimental Illumina [1]

References

PubMed ID: 25186727
The genomic substrate for adaptive radiation in African cichlid fish
"Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
"Nature (2014) 513:375-381