Stem-loop mze-mir-135c

Accession

MI0034173

Description

Metriaclima zebra mze-mir-135c precursor miRNA

Sequence

UAUGGCUUUUUAUUCCUAUGUGAugaugaaaaguguucAUGUAGGAACAGAAGCCAUUUU
.(((((((((..(((((((((((..((.....))..))))))))))).)))))))))...

Structure

--U         UA           ug  g 
   AUGGCUUUU  UUCCUAUGUGA  au a
   |||||||||  |||||||||||  || a
   UACCGAAGA  AAGGAUGUAcu  ug a
UUU         -C           ug  a 

Annotation confidence Not enough data

Genome context

AGTA03000170.1: 311800-311859 [+]

Mature mze-miR-135c

• Accession: MIMAT0042388
• Description: Metriaclima zebra mze-miR-135c mature miRNA
• Sequence: 1 - UAUGGCUUUUUAUUCCUAUGUGA - 23
• Evidence: experimental ; Illumina [1]

Mature mze-miR-135c-3p

• Accession: MIMAT0042389
• Description: Metriaclima zebra mze-miR-135c-3p mature miRNA
• Sequence: 39 - AUGUAGGAACAGAAGCCAUUUU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381