miRBase entry: mze-mir-212a

Stem-loop mze-mir-212a

Accession

MI0034166

Description

Metriaclima zebra mze-mir-212a precursor miRNA

Sequence

accuuggcucuagacugcuuacugcuaaaacuccuccaaaguacagUAACAGUCUACAGUCAUGGCU
.((.(((((.(((((((.((((((...................))))))))))))).))))).))..

Structure

-a  u     c       c      cuaaaacu 
  cc uggcu uagacug uuacug        c
  || ||||| ||||||| ||||||        c
  GG ACUGA AUCUGAC AAUgac        u
UC  U     C       -      augaaacc

Annotation confidence Not enough data

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Genome context

AGTA03000129.1: 1607911-1607977 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from mze-mir-212a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature mze-miR-212a

Accession	MIMAT0042381
Description	Metriaclima zebra mze-miR-212a mature miRNA
Sequence	47 - UAACAGUCUACAGUCAUGGCU - 67
Evidence	experimental Illumina [1]

References

PubMed ID: 25186727
The genomic substrate for adaptive radiation in African cichlid fish
"Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
"Nature (2014) 513:375-381