Stem-loop mze-mir-212a

Accession

MI0034166

Description

Metriaclima zebra mze-mir-212a precursor miRNA

Sequence

accuuggcucuagacugcuuacugcuaaaacuccuccaaaguacagUAACAGUCUACAGUCAUGGCU
.((.(((((.(((((((.((((((...................))))))))))))).))))).))..

Structure

-a  u     c       c      cuaaaacu 
  cc uggcu uagacug uuacug        c
  || ||||| ||||||| ||||||        c
  GG ACUGA AUCUGAC AAUgac        u
UC  U     C       -      augaaacc 

Annotation confidence Not enough data

Genome context

AGTA03000129.1: 1607911-1607977 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from mze-mir-212a

Mature mze-miR-212a

• Accession: MIMAT0042381
• Description: Metriaclima zebra mze-miR-212a mature miRNA
• Sequence: 47 - UAACAGUCUACAGUCAUGGCU - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381