miRBase entry: mze-mir-139

Stem-loop mze-mir-139


Accession
MI0034165
Description
Metriaclima zebra mze-mir-139 precursor miRNA


Sequence

UCUACAGUGCAUGUGUCUCCAGUauguuagugaugcuacuggagacccagcucuguuggaau
(((((((.((.((.((((((((((.((.......)))))))))))).)))).))).))))..

Structure
--    -   U  A  U          u  ua 
  UCUA CAG GC UG GUCUCCAGUa gu  g
  |||| ||| || || |||||||||| ||  u
  aggu guc cg ac cagaggucau cg  g
ua    u   u  -  c          -  ua 


Annotation confidence Not enough data
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Genome context
AGTA03000100.1: 429047-429108 [+]

Database links

Mature mze-miR-139

Accession MIMAT0042380
Description Metriaclima zebra mze-miR-139 mature miRNA
Sequence 1 - UCUACAGUGCAUGUGUCUCCAGU - 23
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381