miRBase entry: mze-mir-24a-4

Stem-loop mze-mir-24a-4


Accession
MI0034158
Description
Metriaclima zebra mze-mir-24a-4 precursor miRNA


Sequence

ugccuacugagcugauaacaguuagauauuaacaagcacUGGCUCAGUUCAGCAGGAAC
..(((.(((((((((...((((...............))))..))))))))).)))...

Structure
-ug   a         uaa    uagaua 
   ccu cugagcuga   cagu      u
   ||| |||||||||   ||||      u
   GGA GACUUGACU   GUca      a
CAA   C         -CG    cgaaca 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
AGTA03000035.1: 9108395-9108453 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from mze-mir-24a-4
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mze-miR-24a

Accession MIMAT0042369
Description Metriaclima zebra mze-miR-24a mature miRNA
Sequence 40 - UGGCUCAGUUCAGCAGGAAC - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381