miRBase entry: mze-mir-24a-4

Stem-loop mze-mir-24a-4

Accession

MI0034158

Description

Metriaclima zebra mze-mir-24a-4 precursor miRNA

Sequence

ugccuacugagcugauaacaguuagauauuaacaagcacUGGCUCAGUUCAGCAGGAAC
..(((.(((((((((...((((...............))))..))))))))).)))...

Structure

-ug   a         uaa    uagaua 
   ccu cugagcuga   cagu      u
   ||| |||||||||   ||||      u
   GGA GACUUGACU   GUca      a
CAA   C         -CG    cgaaca

Annotation confidence Not enough data

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Genome context

AGTA03000035.1: 9108395-9108453 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from mze-mir-24a-4

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature mze-miR-24a

Accession	MIMAT0042369
Description	Metriaclima zebra mze-miR-24a mature miRNA
Sequence	40 - UGGCUCAGUUCAGCAGGAAC - 59
Evidence	experimental Illumina [1]

References

PubMed ID: 25186727
The genomic substrate for adaptive radiation in African cichlid fish
"Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
"Nature (2014) 513:375-381