miRBase entry: mze-mir-132a

Stem-loop mze-mir-132a


Accession
MI0034153
Description
Metriaclima zebra mze-mir-132a precursor miRNA


Sequence

accguggcauuagauuguuacuguaguaacagcaccaguggUAACAGUCUACAGCCAUGGUC
((((((((..((((((((((((((.((....))))....))))))))))))..)))))))).

Structure
-        au            ----  a  a 
 accguggc  uagauuguuacu    gu gu a
 ||||||||  ||||||||||||    || ||  
 UGGUACCG  AUCUGACAAUgg    ca cg c
C        AC            ugac  -  a 


Annotation confidence Not enough data
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Genome context
AGTA03000129.1: 1608187-1608248 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from mze-mir-132a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mze-miR-132a

Accession MIMAT0042371
Description Metriaclima zebra mze-miR-132a mature miRNA
Sequence 42 - UAACAGUCUACAGCCAUGGUC - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381