miRBase entry: mze-mir-96-1

Stem-loop mze-mir-96-1


Accession
MI0034145
Description
Metriaclima zebra mze-mir-96-1 precursor miRNA


Sequence

UUUGGCACUAGCACAUUUUUGCUucuguauauauacuuugagcaauuauguguagugccaauau
.(((((((((.(((((..((((((..(((....)))...))))))..))))))))))))))...

Structure
--U         G     UU      -cu   u 
   UUGGCACUA CACAU  UUGCUu   gua a
   ||||||||| |||||  ||||||   |||  
   aaccgugau gugua  aacgag   cau u
uau         -     uu      uuu   a 


Annotation confidence Not enough data
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Genome context
AGTA03000163.1: 2031915-2031978 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from mze-mir-96-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mze-miR-96

Accession MIMAT0042365
Description Metriaclima zebra mze-miR-96 mature miRNA
Sequence 1 - UUUGGCACUAGCACAUUUUUGCU - 23
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381