miRBase entry: mze-mir-15a

Stem-loop mze-mir-15a


Accession
MI0034142
Description
Metriaclima zebra mze-mir-15a precursor miRNA


Sequence

UAGCAGCACGGAAUGGUUUGUGgguuauacugagaugcaggccauacugugcugccgca
..(((((((((.((((((((((..(((...)))..)))))))))).)))))))))....

Structure
--UA         A          gg   u 
    GCAGCACGG AUGGUUUGUG  uua  
    ||||||||| ||||||||||  ||| a
    cgucguguc uaccggacgu  agu  
acgc         a          ag   c 


Annotation confidence Not enough data
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Genome context
AGTA03000193.1: 2298832-2298890 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from mze-mir-15a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mze-miR-15a

Accession MIMAT0042363
Description Metriaclima zebra mze-miR-15a mature miRNA
Sequence 1 - UAGCAGCACGGAAUGGUUUGUG - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381