miRBase entry: mze-mir-338-3

Stem-loop mze-mir-338-3


Accession
MI0034135
Description
Metriaclima zebra mze-mir-338-3 precursor miRNA


Sequence

aacaauauccuggugcugccugagugcucccuaaagacUCCAGCAUCAGUGAUUUUGUUG
(((((.((((((((((((...((((.((......))))))))))))))).))).))))).

Structure
-     u   -         ccu    g  cc 
 aacaa auc cuggugcug   gagu cu  c
 ||||| ||| |||||||||   |||| ||   
 UUGUU UAG GACUACGAC   CUca ga  u
G     U   U         ---    -  aa 


Annotation confidence Not enough data
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Genome context
AGTA03000218.1: 164363-164422 [-]

Database links

Mature mze-miR-338

Accession MIMAT0042360
Description Metriaclima zebra mze-miR-338 mature miRNA
Sequence 39 - UCCAGCAUCAGUGAUUUUGUUG - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381