miRBase entry: mze-mir-107

Stem-loop mze-mir-107


Accession
MI0034123
Description
Metriaclima zebra mze-mir-107 precursor miRNA


Sequence

agcuucuuuacaguguugccuuguggcauggcgaucaAGCAGCAUUGUACAGGGCUAUC
((((.((.(((((((((((.((((.((...)).).)))))))))))))).))))))...

Structure
---    u  u           c   - g  a 
   agcu cu uacaguguugc uug u gc  
   |||| || ||||||||||| ||| | || u
   UCGG GA AUGUUACGACG Aac a cg  
CUA    -  C           -   u g  g 


Annotation confidence Not enough data
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Genome context
AGTA03000290.1: 26954-27012 [+]

Database links

Mature mze-miR-107

Accession MIMAT0042351
Description Metriaclima zebra mze-miR-107 mature miRNA
Sequence 38 - AGCAGCAUUGUACAGGGCUAUC - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381