miRBase entry: mze-mir-429b

Stem-loop mze-mir-429b

Accession

MI0034119

Description

Metriaclima zebra mze-mir-429b precursor miRNA

Sequence

gucuuaccagacaugguuagauguaauuauuggugucUAAUACUGUCUGGUAAUGCCGU
((.((((((((((..(((((((............)))))))..)))))))))).))...

Structure

---  c          ug       guaau 
   gu uuaccagaca  guuagau     u
   || ||||||||||  |||||||      
   CG AAUGGUCUGU  UAAUcug     a
UGC  U          CA       ugguu

Annotation confidence Not enough data

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Genome context

AGTA03000309.1: 1058707-1058765 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from mze-mir-429b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature mze-miR-429b

Accession	MIMAT0042347
Description	Metriaclima zebra mze-miR-429b mature miRNA
Sequence	38 - UAAUACUGUCUGGUAAUGCCGU - 59
Evidence	experimental Illumina [1]

References

PubMed ID: 25186727
The genomic substrate for adaptive radiation in African cichlid fish
"Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
"Nature (2014) 513:375-381