miRBase entry: mze-mir-731

Stem-loop mze-mir-731

Accession

MI0034114

Description

Metriaclima zebra mze-mir-731 precursor miRNA

Sequence

AAUGACACGUUUUCUCCCGGAUUgcugugagcaggaaacgcaaccgggaauuucgugucagcca
..(((((((.....((((((.((((.((.........))))))))))))....)))))))....

Structure

--AA       UUUUC      A    u  gag 
    UGACACG     UCCCGG UUgc gu   c
    |||||||     |||||| |||| ||   a
    acugugc     agggcc aacg ca   g
accg       -uuua      -    -  aag

Annotation confidence Not enough data

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Genome context

AGTA03000067.1: 794089-794152 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from mze-mir-731

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature mze-miR-731

Accession	MIMAT0042342
Description	Metriaclima zebra mze-miR-731 mature miRNA
Sequence	1 - AAUGACACGUUUUCUCCCGGAUU - 23
Evidence	experimental Illumina [1]

References

PubMed ID: 25186727
The genomic substrate for adaptive radiation in African cichlid fish
"Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
"Nature (2014) 513:375-381