miRBase entry: mze-mir-99b

Stem-loop mze-mir-99b

Accession

MI0034096

Description

Metriaclima zebra mze-mir-99b precursor miRNA

Sequence

AACCCGUAGAUCCGAUCUUGUGgcgaaucugacagcacaagcucgccucugugggucuu
.(((((((((..(((.((((((.............)))))).)))..)))))))))...

Structure

--A         UC   U      gcgaa 
   ACCCGUAGA  CGA CUUGUG     u
   |||||||||  ||| ||||||     c
   ugggugucu  gcu gaacac     u
uuc         cc   c      gacag

Annotation confidence Not enough data

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Genome context

AGTA03000089.1: 2743173-2743231 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from mze-mir-99b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature mze-miR-99b

Accession	MIMAT0042328
Description	Metriaclima zebra mze-miR-99b mature miRNA
Sequence	1 - AACCCGUAGAUCCGAUCUUGUG - 22
Evidence	experimental Illumina [1]

References

PubMed ID: 25186727
The genomic substrate for adaptive radiation in African cichlid fish
"Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
"Nature (2014) 513:375-381