miRBase entry: mze-mir-301b-1

Stem-loop mze-mir-301b-1

Accession

MI0034092

Description

Metriaclima zebra mze-mir-301b-1 precursor miRNA

Sequence

cuuugacaauguugcacuacuguaccauccauucuagCAGUGCAAUAGUAUUGUCAUAGC
((.(((((((((((((((.(((............))).))))))))...))))))).)).

Structure

-  u       ---        a   uacca 
 cu ugacaau   guugcacu cug     u
 || |||||||   |||||||| |||      
 GA ACUGUUA   UAACGUGA gau     c
C  U       UGA        C   cuuac

Annotation confidence Not enough data

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Genome context

AGTA03000002.1: 7169839-7169898 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from mze-mir-301b-1

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature mze-miR-301b

Accession	MIMAT0042324
Description	Metriaclima zebra mze-miR-301b mature miRNA
Sequence	38 - CAGUGCAAUAGUAUUGUCAUAGC - 60
Evidence	experimental Illumina [1]

References

PubMed ID: 25186727
The genomic substrate for adaptive radiation in African cichlid fish
"Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
"Nature (2014) 513:375-381