Stem-loop mze-mir-301b-1

Accession

MI0034092

Description

Metriaclima zebra mze-mir-301b-1 precursor miRNA

Sequence

cuuugacaauguugcacuacuguaccauccauucuagCAGUGCAAUAGUAUUGUCAUAGC
((.(((((((((((((((.(((............))).))))))))...))))))).)).

Structure

-  u       ---        a   uacca 
 cu ugacaau   guugcacu cug     u
 || |||||||   |||||||| |||      
 GA ACUGUUA   UAACGUGA gau     c
C  U       UGA        C   cuuac 

Annotation confidence Not enough data

Genome context

AGTA03000002.1: 7169839-7169898 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from mze-mir-301b-1

Mature mze-miR-301b

• Accession: MIMAT0042324
• Description: Metriaclima zebra mze-miR-301b mature miRNA
• Sequence: 38 - CAGUGCAAUAGUAUUGUCAUAGC - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381