Stem-loop mze-mir-214-1

Accession

MI0034087

Description

Metriaclima zebra mze-mir-214-1 precursor miRNA

Sequence

ugccugucuacacuugcugugcagaccuucugcuccuguACAGCAGGCACAGACAGGCAGA
(((((((((...((((((((((((...........))))))))))))...)))))))))..

Structure

--         aca            accu 
  ugccugucu   cuugcugugcag    u
  |||||||||   ||||||||||||    c
  ACGGACAGA   GGACGACAuguc    u
AG         CAC            cucg 

Annotation confidence Not enough data

Genome context

AGTA03000118.1: 3413742-3413802 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from mze-mir-214-1

Mature mze-miR-214

• Accession: MIMAT0042320
• Description: Metriaclima zebra mze-miR-214 mature miRNA
• Sequence: 40 - ACAGCAGGCACAGACAGGCAGA - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381