Stem-loop mze-mir-221-1

Accession

MI0034081

Description

Metriaclima zebra mze-mir-221-1 precursor miRNA

Sequence

accuggcauacaauguagauuucugugugguucaauucuacAGCUACAUUGUCUGCUGGGUUUC
((((((((.(((((((((....(((((.((......)))))))))))))))).))))))))...

Structure

---        u         auuu     u  uu 
   accuggca acaauguag    cugug gg  c
   |||||||| |||||||||    ||||| ||   
   UGGGUCGU UGUUACAUC    GAcau cu  a
CUU        C         ----     -  ua 

Annotation confidence Not enough data

Genome context

AGTA03000213.1: 206082-206145 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mze-mir-221-1

Mature mze-miR-221

• Accession: MIMAT0042316
• Description: Metriaclima zebra mze-miR-221 mature miRNA
• Sequence: 42 - AGCUACAUUGUCUGCUGGGUUUC - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381