miRBase entry: mze-mir-2188

Stem-loop mze-mir-2188


Accession
MI0034064
Description
Metriaclima zebra mze-mir-2188 precursor miRNA


Sequence

AAGGUCCAACCUCACAUGUCCUgugcggcugaaggaaggcugugugaggucagaccuauc
.(((((..((((((((((.(((.(.(.......).)))).))))))))))..)))))...

Structure
--A     CA          U   g g gg 
   AGGUC  ACCUCACAUG CCU u c  c
   |||||  |||||||||| ||| | |  u
   uccag  uggagugugu gga a g  g
cua     ac          c   - g aa 


Annotation confidence Not enough data
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Genome context
AGTA03000050.1: 849382-849441 [+]

Database links

Mature mze-miR-2188

Accession MIMAT0042304
Description Metriaclima zebra mze-miR-2188 mature miRNA
Sequence 1 - AAGGUCCAACCUCACAUGUCCU - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381