miRBase entry: mze-mir-462

Stem-loop mze-mir-462

Accession

MI0034049

Description

Metriaclima zebra mze-mir-462 precursor miRNA

Sequence

UAACGGAACCCAUAAUGCAGCUGugauucugagccccagcugguuaugggguccguuuc
.((((((.((((((((.((((((.(..........))))))))))))))).))))))..

Structure

-U      A        G      u auuc 
  AACGGA CCCAUAAU CAGCUG g    u
  |||||| |||||||| |||||| |     
  uugccu ggguauug gucgac c    g
cu      g        -      - ccga

Annotation confidence Not enough data

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Genome context

AGTA03000067.1: 793590-793648 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from mze-mir-462

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature mze-miR-462

Accession	MIMAT0042293
Description	Metriaclima zebra mze-miR-462 mature miRNA
Sequence	1 - UAACGGAACCCAUAAUGCAGCUG - 23
Evidence	experimental Illumina [1]

References

PubMed ID: 25186727
The genomic substrate for adaptive radiation in African cichlid fish
"Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
"Nature (2014) 513:375-381