miRBase entry: mze-mir-462

Stem-loop mze-mir-462


Accession
MI0034049
Description
Metriaclima zebra mze-mir-462 precursor miRNA


Sequence

UAACGGAACCCAUAAUGCAGCUGugauucugagccccagcugguuaugggguccguuuc
.((((((.((((((((.((((((.(..........))))))))))))))).))))))..

Structure
-U      A        G      u auuc 
  AACGGA CCCAUAAU CAGCUG g    u
  |||||| |||||||| |||||| |     
  uugccu ggguauug gucgac c    g
cu      g        -      - ccga 


Annotation confidence Not enough data
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Genome context
AGTA03000067.1: 793590-793648 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from mze-mir-462
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mze-miR-462

Accession MIMAT0042293
Description Metriaclima zebra mze-miR-462 mature miRNA
Sequence 1 - UAACGGAACCCAUAAUGCAGCUG - 23
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381