miRBase entry: mze-let-7a-3

Stem-loop mze-let-7a-3


Accession
MI0034043
Description
Metriaclima zebra mze-let-7a-3 precursor miRNA


Sequence

UGAGGUAGUAGGUUGUAUAGUUuggugggugggacugcacccugcucaggugauaacuauacagucuauugccuuccc
.(((((((((((((((((((((...((((((((.......))))))))......)))))))))))))))))))))...

Structure
--U                     ---ugg        ac 
   GAGGUAGUAGGUUGUAUAGUU      uggguggg  u
   |||||||||||||||||||||      ||||||||  g
   uuccguuaucugacauaucaa      acucgucc  c
ccc                     uagugg        ca 


Annotation confidence Not enough data
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Genome context
AGTA03000127.1: 2609310-2609387 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from mze-let-7a-3
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mze-let-7a

Accession MIMAT0042291
Description Metriaclima zebra mze-let-7a mature miRNA
Sequence 1 - UGAGGUAGUAGGUUGUAUAGUU - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381