miRBase entry: mze-mir-9-4

Stem-loop mze-mir-9-4


Accession
MI0034027
Description
Metriaclima zebra mze-mir-9-4 precursor miRNA


Sequence

UCUUUGGUUAUCUAGCUGUAUGAgugacguacauucuucauaaagcuagauaaccgaaagu
..(((((((((((((((.((((((.((.......)))))))).)))))))))))))))...

Structure
-UC               G      u  cg 
   UUUGGUUAUCUAGCU UAUGAg ga  u
   ||||||||||||||| |||||| ||  a
   aagccaauagaucga auacuu cu  c
uga               a      -  ua 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
AGTA03000049.1: 4139643-4139703 [+]

Database links

Mature mze-miR-9

Accession MIMAT0042284
Description Metriaclima zebra mze-miR-9 mature miRNA
Sequence 1 - UCUUUGGUUAUCUAGCUGUAUGA - 23
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381