miRBase entry: mze-mir-92a-2

Stem-loop mze-mir-92a-2


Accession
MI0034021
Description
Metriaclima zebra mze-mir-92a-2 precursor miRNA


Sequence

agguggggaucgguagcaaugcuguguuccuccaggUAUUGCACUUGUCCCGGCCUGU
((((.(((((.(((.((((((((..(.....)..))))))))))).))))).))))..

Structure
--    g     c   a        gu u 
  aggu gggau ggu gcaaugcu  g u
  |||| ||||| ||| ||||||||  | c
  UCCG CCCUG UCA CGUUAUgg  c c
UG    G     U   -        ac u 


Annotation confidence Not enough data
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Genome context
AGTA03000036.1: 4188129-4188186 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from mze-mir-92a-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mze-miR-92a

Accession MIMAT0042283
Description Metriaclima zebra mze-miR-92a mature miRNA
Sequence 37 - UAUUGCACUUGUCCCGGCCUGU - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381