miRBase entry: mze-mir-92a-1

Stem-loop mze-mir-92a-1


Accession
MI0034020
Description
Metriaclima zebra mze-mir-92a-1 precursor miRNA


Sequence

agguugggagagguggcaaugcucugugcuuguguggUAUUGCACUUGUCCCGGCCUGU
(((((((((.(((((.(((((((....((....)))))))))))))).)))))))))..

Structure
--         g     g       cugu  u 
  agguuggga aggug caaugcu    gc u
  ||||||||| ||||| |||||||    ||  
  UCCGGCCCU UUCAC GUUAUgg    ug g
UG         G     -       ----  u 


Annotation confidence Not enough data
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Genome context
AGTA03000134.1: 1276024-1276082 [+]
Clustered miRNAs
5 other miRNAs are < 10 kb from mze-mir-92a-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mze-miR-92a

Accession MIMAT0042283
Description Metriaclima zebra mze-miR-92a mature miRNA
Sequence 38 - UAUUGCACUUGUCCCGGCCUGU - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381