miRBase entry: mze-mir-21-1

Stem-loop mze-mir-21-1


Accession
MI0034018
Description
Metriaclima zebra mze-mir-21-1 precursor miRNA


Sequence

UAGCUUAUCAGACUGGUGUUGGCuguuggaugugcuuggcaacagcggucuguaagcuggc
(((((((.(((((((.(((((.(.((.......))..).))))).))))))))))))))..

Structure
--       U       G     G -u  ug 
  UAGCUUA CAGACUG UGUUG C  gu  g
  ||||||| ||||||| ||||| |  ||  a
  gucgaau gucuggc acaac g  cg  u
cg       -       g     g uu  ug 


Annotation confidence Not enough data
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Genome context
AGTA03000100.1: 3221138-3221198 [-]

Database links

Mature mze-miR-21

Accession MIMAT0042282
Description Metriaclima zebra mze-miR-21 mature miRNA
Sequence 1 - UAGCUUAUCAGACUGGUGUUGGC - 23
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381