miRBase entry: mze-mir-10b

Stem-loop mze-mir-10b


Accession
MI0034012
Description
Metriaclima zebra mze-mir-10b precursor miRNA


Sequence

UACCCUGUAGAACCGAAUGUGUguggagcugccucagucacagauuggguucuuggggaguc
..(((((.((((((.(((.((((..(((....)))...)))).))).)))))))))))....

Structure
--UA     U      G   G    -ug   c 
    CCCUG AGAACC AAU UGUg   gag u
    ||||| |||||| ||| ||||   |||  
    ggggu ucuugg uua acac   cuc g
cuga     -      g   g    uga   c 


Annotation confidence Not enough data
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Genome context
AGTA03000073.1: 2230165-2230226 [-]

Database links

Mature mze-miR-10b

Accession MIMAT0042277
Description Metriaclima zebra mze-miR-10b mature miRNA
Sequence 1 - UACCCUGUAGAACCGAAUGUGU - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381