Stem-loop abu-mir-16c

Accession

MI0033998

Description

Astatotilapia burtoni abu-mir-16c precursor miRNA

Sequence

AAGCAGCACAUAACAUACUGGUAaugcagugaaaaauaccaguaaugaugugcugcuacg
.((((((((((....((((((((.............))))))))...))))))))))...

Structure

--A          AACA        augca 
   AGCAGCACAU    UACUGGUA     g
   ||||||||||    ||||||||     u
   ucgucgugua    augaccau     g
gca          -gua        aaaaa 

Annotation confidence Not enough data

Genome context

JH425774.1: 57025-57084 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from abu-mir-16c

Mature abu-miR-16c

• Accession: MIMAT0042263
• Description: Astatotilapia burtoni abu-miR-16c mature miRNA
• Sequence: 1 - AAGCAGCACAUAACAUACUGGUA - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381