Stem-loop abu-mir-728b

Accession

MI0033991

Description

Astatotilapia burtoni abu-mir-728b precursor miRNA

Sequence

aaauguaguagacuuuaaguauacauguggaacuggggaguAUACUAAGUACACUACGUUUA
(((((((((..((((..(((((((.(.(.......).).)))))))))))..))))))))).

Structure

-         ag    ua       a g gg 
 aaauguagu  acuu  aguauac u u  a
 |||||||||  ||||  ||||||| | |  a
 UUUGCAUCA  UGAA  UCAUAug g g  c
A         CA    --       a g gu 

Annotation confidence Not enough data

Genome context

JH425462.1: 957284-957345 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from abu-mir-728b

Mature abu-miR-728b

• Accession: MIMAT0042257
• Description: Astatotilapia burtoni abu-miR-728b mature miRNA
• Sequence: 42 - AUACUAAGUACACUACGUUUA - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381