Stem-loop abu-mir-10546-2

Accession

MI0033970

Description

Astatotilapia burtoni abu-mir-10546-2 precursor miRNA

Sequence

CAGGGUUGGUACUGAUGGACCaggggcucuacugguccaucaguaccaacccuguc
(((((((((((((((((((((((........)))))))))))))))))))))))..

Structure

--                       ggg 
  CAGGGUUGGUACUGAUGGACCag   c
  |||||||||||||||||||||||    
  gucccaaccaugacuaccugguc   u
cu                       auc 

Annotation confidence Not enough data

Genome context

JH425483.1: 843714-843769 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from abu-mir-10546-2

Mature abu-miR-10546

• Accession: MIMAT0042235
• Description: Astatotilapia burtoni abu-miR-10546 mature miRNA
• Sequence: 1 - CAGGGUUGGUACUGAUGGACC - 21
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381